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ORIGINATOR(1)		     Generic Mapping Tools		 ORIGINATOR(1)

NAME
       originator - Associate seamounts with hotspot point sources

SYNOPSIS
       originator  [infile(s)]	-Estage_file  -Fhs_file	 [  -C	] [ -Dd_km ] [
       -H[i][nrec] ] [ -L[flag] ] [ -Nupper_age ] [ -Qr/t ] [ -S[n_hs] ] [  -T
       ]    [	 -V    ]     -Wmaxdist	  ]   [	  -Z   ]   [   -:[i|o]	 ]   [
       -bi[s|S|d|D[ncol]|c[var1/...]] ]

DESCRIPTION
       originator reads (longitude,  latitude,	height,	 radius,  crustal_age)
       records	from  infiles  [or standard input] and uses the given Absolute
       Plate Motion (APM) stage poles and the list  of	hotspot	 locations  to
       determine  the most likely origin (hotspot) for each seamount.  It does
       so by calculating flowlines back in time and  determining  the  closest
       approach	 to  all  hotspots.   The output consists of the input records
       with four  additional  fields  added  for  each	of  the	 n_hs  closest
       hotspots.  The four fields are the hotspot id (e.g., HWI), the stage id
       of the flowline segment	that  came  closest,  the  pseudo-age  of  the
       seamount,  and the closest distance to the hotspot (in km).  See option
       -: on how to read  (latitude,  longitude,height,	 radius,  crustal_age)
       files.
	    No	space  between	the  option flag and the associated arguments.
       Use upper case for the option flags and lower case for modifiers.

       infile(s)
	      Seamount data file(s) to be analyzed.  If	 not  given,  standard
	      input is read.

       -E     Give  file with rotation parameters.  This file must contain one
	      record for each rotation; each record must be of	the  following
	      format:

		   lon lat tstart [tstop] angle [ khat a b c d e f g df ]

	      where  tstart  and  tstop	 are  in  Myr and lon lat angle are in
	      degrees.	tstart and tstop are the ages of  the  old  and	 young
	      ends of a stage.	If -C is set then a total reconstruction rota‐
	      tion is expected and tstop is implicitly set to 0 and should not
	      be  specified  in	 the  file.   If a covariance matrix C for the
	      rotation is available it must be specified in a format using the
	      nine  optional terms listed in brackets.	Here, C = (g/khat)*[ a
	      b d; b c e; d e f ] which shows C made up of three row  vectors.
	      If  the  degrees of freedom (df) in fitting the rotation is 0 or
	      not given it is set to 10000.  Blank  lines  and	records	 whose
	      first column contains # will be ignored.

       -F     Give  file  with	hotspot locations.  This file must contain one
	      record for each hotspot to be considered; each record must be of
	      the following format:

		   lon lat hs_abbrev hs_id r t_off t_on create fit plot name

	      E.g., for Hawaii this may look like

	      205  20	HWI  1	  25   0    90	 Y    Y	   Y	Hawaii

	      Most  applications only need the first 4 columns which thus rep‐
	      resents the minimal hotspot information record type.  The abbre‐
	      viation  may  be	maximum	 3 characters long.  The id must be an
	      integer from 1-32.  The positional uncertainty of the hotspot is
	      given  by	 r  (in km).  The t_off and t_on variables are used to
	      indicate the active time-span of the hotspot.  The create,  fit,
	      and  plot indicators are either Y or N and are used by some pro‐
	      grams to indicate if the hotspot is  included  in	 the  ID-grids
	      used  to	determine rotations, if the hotspot chain will be used
	      to determine rotations, and if the hotspot should be included in
	      various  plots.	The name is a 32-character maximum text string
	      with the full hotspot name.  Blank lines and records whose first
	      column contains # will be ignored.

OPTIONS
       -C     Expect  Total Reconstruction Rotations rather than Forward Stage
	      Rotations [Default].  File format is similar to the  stage  pole
	      format  except that the tstart column is not present (assumed to
	      be 0 Ma).

       -D     Sets the flowline sampling interval in km.  [Default is 5].

       -H     Input file(s) has header record(s).  If used, the default number
	      of  header records is N_HEADER_RECS.  Use -Hi if only input data
	      should have  header  records  [Default  will  write  out	header
	      records  if  the	input  data  have them]. Blank lines and lines
	      starting with # are always skipped.

       -L     Output closest approach for nearest hotspot only	(ignores  -S).
	      Choose  -Lt for (time, dist, z) [Default], -Lw for (omega, dist,
	      z), and -Ll for (lon, lat, time, dist, z).  Normally, dist is in
	      km;  use	upper  case  modifiers	TWL  to	 get dist in spherical
	      degrees.

       -N     Set the maximum age to extend the oldest stage back in time  [no
	      extension].

       -Q

       Input files only has (x,y,z); specify constant values for r,t that
	      will be implied for each record.

       -S     Set the number of closest hotspots to report [Default is 1].

       -T     Truncate	seamount  ages exceeding the upper age set with -N [no
	      truncation].

       -V     Selects verbose mode, which will send progress reports to stderr
	      [Default runs "silently"].

       -W     Only  report those seamounts whose flowlines came within maxdist
	      to any hotspot [Default reports all seamounts].

       -Z     Use the hotspot ID number rather than the	 name  tag  in	output
	      records.

       -:     Toggles  between	(longitude,latitude)  and (latitude,longitude)
	      input and/or output.  [Default is (longitude,latitude)].	Append
	      i	 to  select  input  only or o to select output only.  [Default
	      affects both].

       -bi    Selects binary input.  Append s for single precision [Default is
	      d	 (double)].   Uppercase	 S  or	D  will	 force	byte-swapping.
	      Optionally, append ncol, the number of columns  in  your	binary
	      input  file if it exceeds the columns needed by the program.  Or
	      append c	if  the	 input	file  is  netCDF.  Optionally,	append
	      var1/var2/...  to specify the variables to be read.  [Default is
	      5 input columns].

EXAMPLES
       To find the likely (hotspot) origins of the  seamounts  represented  by
       the (x,y,z,r,tc) points in the file seamounts.d, using the DC85.d Euler
       poles and the pac_hs.d list of possible hotspots, and report the 2 most
       likely hotspot candidates for each seamount, run

       originator seamounts.d -S 2 -E DC85.d -F pac_hs.d > origins.d

COORDINATES
       Data  coordinates  are assumed to be geodetic and will automatically be
       converted to geocentric before spherical rotations are  performed.   We
       convert	back  to  geodetic coordinates for output.  Note: If your data
       already are geocentric, you can avoid the conversion by using  --ELLIP‐
       SOID=sphere.

SEE ALSO
       GMT(1),	project(1), grdrotater(1), grdspotter(1), mapproject(1), back‐
       tracker(1), hotspotter(1)

REFERENCES
       Wessel, P., 1999, "Hotspotting" tools  released,	 EOS  Trans.  AGU,  80
       (29), p. 319.

GMT 4.5.14			  1 Nov 2015			 ORIGINATOR(1)
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